USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P20671 USC-OGP 2-DE database:  P20671 P20671 General information about the entry View entry in simple text format Entry name H2A1D_HUMAN Primary accession number P20671 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2A type 1-D; AltName: Full=Histone H2A.3; AltName: Full=Histone H2A/g;. Gene name Name=HIST1H2AD Synonyms=H2AFG Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1333: pI=4.59; Mw=16158 SPOT OGP-1335: pI=5.02; Mw=16085 SPOT OGP-1336: pI=5.13; Mw=15865 SPOT OGP-1338: pI=5.68; Mw=15649 Cross-references UniProtKB/Swiss-Prot P20671; H2A1D_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2A1D_HUMAN Primary accession number P20671 Secondary accession number(s) A0PK91 P57754 Q6FGY6 Sequence was last modified on  January 23, 2007 (version 2) Annotations were last modified on  March 15, 2017 (version 168) Name and origin of the protein Description RecName: Full=Histone H2A type 1-D; AltName: Full=Histone H2A.3; AltName: Full=Histone H2A/g; Gene name Name=HIST1H2AD Synonyms=H2AFG Encoded on Name=HIST1H2AD; Synonyms=H2AFG Keywords Acetylation; Chromosome; Citrullination; Complete proteome; DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X16495; CAA34511.1; -; Genomic_DNA EMBL Z80776; CAB02538.1; -; Genomic_DNA EMBL AY131985; AAN59966.1; -; Genomic_DNA EMBL CR541970; CAG46768.1; -; mRNA EMBL CR541999; CAG46796.1; -; mRNA EMBL AL031777; CAB39197.1; -; Genomic_DNA EMBL BC093807; AAH93807.1; -; mRNA EMBL BC093809; AAH93809.1; -; mRNA EMBL BC128035; AAI28036.1; -; mRNA CCDS CCDS4591.1; -; . PIR S06754; S06754; . RefSeq NP_066409.1; NM_021065.3; . UniGene Hs.626666; -; . UniGene Hs.679229; -; . ProteinModelPortal P20671; -; . SMR P20671; -; . BioGrid 109267; 27; . IntAct P20671; 22; . MINT MINT-4589032; -; . STRING 9606.ENSP00000341094; -; . iPTMnet P20671; -; . PhosphoSitePlus P20671; -; . SwissPalm P20671; -; . DMDM 121978; -; . EPD P20671; -; . MaxQB P20671; -; . PaxDb P20671; -; . PeptideAtlas P20671; -; . PRIDE P20671; -; . TopDownProteomics P20671; -; . DNASU 3013; -; . Ensembl ENST00000341023; ENSP00000341094; ENSG00000196866; . GeneID 3013; -; . KEGG hsa:3013; -; . UCSC uc003ngw.5; human; . CTD 3013; -; . GeneCards HIST1H2AD; -; . HGNC HGNC:4729; HIST1H2AD; . HPA HPA041189; -; . MIM 602792; gene; . neXtProt NX_P20671; -; . OpenTargets ENSG00000196866; -; . PharmGKB PA29106; -; . eggNOG KOG1756; Eukaryota; . eggNOG COG5262; LUCA; . GeneTree ENSGT00710000106735; -; . HOGENOM HOG000234652; -; . HOVERGEN HBG009342; -; . InParanoid P20671; -; . KO K11251; -; . OMA GRANTKS; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB P20671; -; . TreeFam TF300137; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-3214858; RMTs methylate histone arginines; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689603; UCH proteinases; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5689901; Metalloprotease DUBs; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . GeneWiki HIST1H2AD; -; . GenomeRNAi 3013; -; . PRO PR:P20671; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000196866; -; . CleanEx HS_HIST1H2AD; -; . Genevisible P20671; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000790; C:nuclear chromatin; IBA:GO_Central; . GO GO:0000786; C:nucleosome; IEA:UniProtKB-KW; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; IBA:GO_Central; . GO GO:0006342; P:chromatin silencing; IBA:GO_Central; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR002119; Histone_H2A; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR032454; Histone_H2A_C; . InterPro IPR032458; Histone_H2A_CS; . Pfam PF00125; Histone; 1; . Pfam PF16211; Histone_H2A_C; 1; . PRINTS PR00620; HISTONEH2A; . SMART SM00414; H2A; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00046; HISTONE_H2A; 1; .

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